Notes:

The notation \n denotes backreference n at protection level 0
The dna is always given at the beginning of an iteration.
The accumulated rna length is always given at the end of an iteration.

iteration 0
dna = IIIPIPIIPC... (7523060 bases)
pattern  !0(!4536645(!800)!2971964)
template \0\1IIIIIIIIIIIIIIIIIIIIIIIPIIIIIIIIIIIIIIIIIIIIIIIP
succesful match of length 7509409
e[0] = IIICCCCPIC... (800 bases)
e[1] = IFPICFPPCF... (7509409 bases)
len(rna) = 1343

iteration 1
dna = IIICCCCPIC... (7510293 bases)
pattern  !605(!2345486(!2574)!5161349)
template \0\1IIICIIIIICICCCIICICIIICPCICCCICIICIIIIIIIIIIIIIP
succesful match of length 7510014
e[0] = IIICIPIICC... (2574 bases)
e[1] = IFPICFPPCF... (7509409 bases)
len(rna) = 1344

iteration 2
dna = IIICIPIICC... (7512115 bases)
pattern  (!7511905)
template \0CIIIICICCICICIICICIICCCP
succesful match of length 7511905
e[0] = IIPIPIICCI... (7511905 bases)
len(rna) = 1345

iteration 3
dna = IIPIPIICCI... (7512061 bases)
pattern  (!823916P)
template IPCCIICICIIIICIIIIIIIIIIIPIICIIC\0
failed match
len(rna) = 1345

iteration 4
dna = IIPIPCIIII... (7511982 bases)
pattern  (!7509409?"IFPICFPPCIFF")(!1)(IFPICFPPCIFP)
template \0\1\1\1\1\2
succesful match of length 7511863
e[0] = IIPIPCIIII... (7511850 bases)
e[1] = P (1 bases)
e[2] = IFPICFPPCI... (12 bases)
len(rna) = 1345

iteration 5
dna = IIPIPCIIII... (7511866 bases)
pattern  (!7509409?"IFPICFPPCIFF")(!4)(IFPICFPPCIFP)
template \0\1\1\1\1\2
succesful match of length 7511745
e[0] = IIPIPCIIII... (7511729 bases)
e[1] = PPPP (4 bases)
e[2] = IFPICFPPCI... (12 bases)
len(rna) = 1345

iteration 6
dna = IIPIPCIIII... (7511757 bases)
pattern  (!7509409?"IFPICFPPCIFF")(!16)(IFPICFPPCIFP)
template \0\1\1\1\1\2
succesful match of length 7511634
e[0] = IIPIPCIIII... (7511606 bases)
e[1] = PPPPPPPPPP... (16 bases)
e[2] = IFPICFPPCI... (12 bases)
len(rna) = 1345

iteration 7
dna = IIPIPCIIII... (7511682 bases)
pattern  (!7509409?"IFPICFPPCIFF")(!64)(IFPICFPPCIFP)
template \0\1\1\1\1\2
succesful match of length 7511557
e[0] = IIPIPCIIII... (7511481 bases)
e[1] = PPPPPPPPPP... (64 bases)
e[2] = IFPICFPPCI... (12 bases)
len(rna) = 1345

iteration 8
dna = IIPIPCIIII... (7511749 bases)
pattern  (!7509409?"IFPICFPPCIFF")(!256)(IFPICFPPCIFP)
template \0\1\1\1\1\2
succesful match of length 7511622
e[0] = IIPIPCIIII... (7511354 bases)
e[1] = PPPPPPPPPP... (256 bases)
e[2] = IFPICFPPCI... (12 bases)
len(rna) = 1345

iteration 9
dna = IIPIPCIIII... (7512390 bases)
pattern  (!7509409?"IFPICFPPCIFF")(!1024)(IFPICFPPCIFP)
template \0\1\1\1\1\2
succesful match of length 7512261
e[0] = IIPIPCIIII... (7511225 bases)
e[1] = PPPPPPPPPP... (1024 bases)
e[2] = IFPICFPPCI... (12 bases)
len(rna) = 1345